Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme4696g00001 ATGGCATCAAGATCCTATGCTAATCTCTTAGACTTAGCTGGTGGAGGAGACTTCCTTGATAATATTCCTCACACCCCAAGAACTCTTCCAAGGGTTATGACTGTTCCTGGAATTATTTCCGACCTGGATGGTGATTCAGATGTTAGTTCTTCTGGATGTCGGGAGCGGAAAATCATCGTGGCAAACATGTTGCCACTGCAGGCTAAAAGAGATATAGAAACTGGTAAATGGTGTTTCAGTTGGGACGAGGATTCAATTCTATTACAATTAAAAGATGGTTTTTCTTCTGATACTGAGGTAATCTATGTGGGTTCCCTCAAGGTGGAGATAGATACGGGTGAGCAGGATGCAGTTGCTCAGAAATTACTGGATGACTTTAATTGTGTGCCCACCTTTCTACCCCATGAGCTGCAGAAAAAGTTCTATCTTGGTTTTTGTAAGCAGCAGCTCTGGCCTCTCTTTCATTATATGCTACCTATATGCTCAGATCACGGTGATCGCTTTGACCGCGCGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATATTTGCAGACAAAGTCATGGAAGTGATCAATCCTGATGATGATTTTGTTTGGGTTCATGACTACCATTTGATGGTTTTGCCTACTTTCTTGAGGAAACGATTTAATCGAGTTAAACTTGGGTTTTTTCTTCATAGTCCTTTCCCGTCGTCTGAAATTTACCGGACTTTGCCAGTAAGGGATGAAATCCTGAAGGGATTGTTGAATTCGGATTTAATTGGTTTTCATACATTTGACTATGCTCGCCACTTTCTTTCTTGCTGCAGTAGAATGCTAGGTCTGGACTATGAATCTAAGCGCGGACATATAGGACTTGATTACTTCGGCCGCACTATATTTATCAAAATTTTGCCTGTAGGCATTCACATGGGTAGGCTTGAATCTGTATTAAATCTTCCTTCTACATCCTCTAAACTAAAAGAGATTCAGGAAGAGTTTAAGGATAAGAAAGTTATTCTGGGTGTTGACGACATGGATATTTTTAAGGGTATCAATCTGAAGTTTCTAGCTGTGGAGCAGCTGCTGCAGCAGAAGCCAGATTTGCAGGGTCAAGTTGTCCTAATTCAAGTTGTAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAGGAAGCAAAGAAGGAAGCATATTCAATTGCTCAAAGGATCAATGATAGATATGGTTCAAATGATTATCAGCCAGTCATTATAATTGACCGTCACGTTCCTCGTTTTGAGAAGAGTGCCTATTATGCTGTTGCCGAGTGCTGCATTGTCAATGCTGTAAGGGATGGGATGAACTTAGTCCCATACAAATATATTGTCTGCAGGCAGGGAACTCCAAAGCTGGACGAAGCTGTGGGCAGAAGAAGTGATTGTCCTCGGACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCACCTTCTCTGAGTGGGGCCATCAGGGTCAATCCTTGGGATATAGAAGCAGTTGCTGATGCTCTGCATTTGGCCCTCACTATTGTGGAACCAGAGAAGAAGTTGCGTCATGAGAAACACTATCGATATGTTAGTTCTCATGACGTGGCATATTGGGCACGCAGTTTTATGCAGGATTTGGAGAGAGCATGCAAAGATCATTACACAAAAAGCATACAAAAGAACCACTAG 1671 0.4219 MASRSYANLLDLAGGGDFLDNIPHTPRTLPRVMTVPGIISDLDGDSDVSSSGCRERKIIVANMLPLQAKRDIETGKWCFSWDEDSILLQLKDGFSSDTEVIYVGSLKVEIDTGEQDAVAQKLLDDFNCVPTFLPHELQKKFYLGFCKQQLWPLFHYMLPICSDHGDRFDRALWQAYVSANKIFADKVMEVINPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLESVLNLPSTSSKLKEIQEEFKDKKVILGVDDMDIFKGINLKFLAVEQLLQQKPDLQGQVVLIQVVNPARGSGKDVQEAKKEAYSIAQRINDRYGSNDYQPVIIIDRHVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPKLDEAVGRRSDCPRTSMLVVSEFIGCSPSLSGAIRVNPWDIEAVADALHLALTIVEPEKKLRHEKHYRYVSSHDVAYWARSFMQDLERACKDHYTKSIQKNH 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme4696g00001 556 CDD GT20_TPS 56 541 IPR001830 GO:0003824|GO:0005992
Trme4696g00001 556 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 49 308 - -
Trme4696g00001 556 Gene3D Glycogen Phosphorylase B; 309 525 - -
Trme4696g00001 556 FunFam Alpha,alpha-trehalose-phosphate synthase 310 525 - -
Trme4696g00001 556 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 56 545 - -
Trme4696g00001 556 Pfam Glycosyltransferase family 20 56 541 IPR001830 GO:0003824|GO:0005992
Trme4696g00001 556 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 30 552 IPR001830 GO:0003824|GO:0005992
Trme4696g00001 556 Gene3D Glycogen Phosphorylase B; 50 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme4696g00001 Trme-Chr4696 315 2074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme4696g00001 1 550 Trehalose Biosynthesis Gene Families AT1G23870 77.158 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme4696g00001 K16055 - gmx:100814952 986.482