Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46936g00001 ATGCAGCTTGTTCATTTTGATTTTAATAGTACTCCGTTTGAGTTGCATGACGACAATTATGTGCTCAAGGCAATGGAATTTGGTGATAGACCACAGAGTTCTACTGTTACACCCAATGTTACAGATGTAGGGGAAGGTTCTAGCATGTCAGGCATGCATCAGTCACAGGTTCCTCCTTCCGCTTCAAGCGTGTCAATTAGGCCTCCAACATCACCCCCACTCCCTGGAATATTAAAGGCAAGAGTCAAGCAGGAACATTGA 261 0.4444 MQLVHFDFNSTPFELHDDNYVLKAMEFGDRPQSSTVTPNVTDVGEGSSMSGMHQSQVPPSASSVSIRPPTSPPLPGILKARVKQEH 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46936g00001 86 PANTHER TRANSCRIPTION FACTOR DP 1 62 IPR015648 GO:0005667|GO:0051726
Trme46936g00001 86 MobiDBLite consensus disorder prediction 30 64 - -
Trme46936g00001 86 Pfam Transcription factor DP 1 49 IPR014889 -
Trme46936g00001 86 MobiDBLite consensus disorder prediction 30 86 - -
Trme46936g00001 86 Gene3D Transcription factor DP 1 63 IPR038168 -
Trme46936g00001 86 SUPERFAMILY E2F-DP heterodimerization region 1 38 IPR037241 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46936g00001 1 33 E2F-DP Transcription Factor Family AT5G02470 60.606 4.31e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46936g00001 K04683 - gmx:100798342 131.339