Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme469149g00001 TTTGCAGGAAATATTGCATCTGGTGCTGCAGCAGGAGCTTCATCCTCCGTCTTTGTTTACTCATTGGATTACGCACGAACTCGCCTTGCAAATGACGCCAAGGCCACGAAGAAAGGAGGAGAGAGGCAATTCAATGGCTTGATTGATGTCTACAGAAAAACATTCCAATCAGATGGTATTGCTGGTCTTTATCGTGGCTTCAATGTTTCGATTGTTGGAATCATTGTCTACCGTGGTTTGTATTTTGGATTGTATGATTCTCTTAAGCCAGTGCTCTTG 279 0.4337 FAGNIASGAAAGASSSVFVYSLDYARTRLANDAKATKKGGERQFNGLIDVYRKTFQSDGIAGLYRGFNVSIVGIIVYRGLYFGLYDSLKPVLL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme469149g00001 93 PRINTS Mitochondrial carrier protein signature 64 82 IPR002067 GO:0055085
Trme469149g00001 93 PRINTS Mitochondrial carrier protein signature 14 32 IPR002067 GO:0055085
Trme469149g00001 93 SUPERFAMILY Mitochondrial carrier 2 92 IPR023395 -
Trme469149g00001 93 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1 93 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme469149g00001 93 Gene3D Mitochondrial carrier domain 1 93 IPR023395 -
Trme469149g00001 93 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Trme469149g00001 93 Pfam Mitochondrial carrier protein 2 92 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme469149g00001 Trme-Chr469149 10 288 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme469149g00001 1 93 Antiporters AT4G28390 82.796 1.56e-43 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme469149g00001 K05863 - mus:103977886 155.606