Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46894g00001 GTCTTTCTCGAAGAGGGTCTCCTTGCCTTTTGGAGAGGTCATCAGGCCAATGTTATAAGATATTTCCCCACACAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATCTTTGGATATTCCAAAGACAAAGACGGGTACTTTAAGTGGTTTGCTGGGAATGTGGCTTCAGGCAGTGCTGCAGGAGCTACTACTTCAATGCTTTTGTACCATTTGGACTACGCACGTACAAGGTTGGCCACTGATGCAGTCGTGTGCCGTGTTACTGGTCAGCGTCACTTTAAAGGACTAATTGACGTATATCGTAAAACCTTATCTACGGATGGAATTGCCGGCTTGTACAGAGGATTTGGGGTTTCAATATTGGGAATCACCTTGTATCGAGGGATGTACTTTGGGATCTATGACACCATGAAGCCTATTGTTTTAGTTGGGCCTTTTGAG 447 0.4407 VFLEEGLLAFWRGHQANVIRYFPTQAFNFAFKGYFKSIFGYSKDKDGYFKWFAGNVASGSAAGATTSMLLYHLDYARTRLATDAVVCRVTGQRHFKGLIDVYRKTLSTDGIAGLYRGFGVSILGITLYRGMYFGIYDTMKPIVLVGPFE 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46894g00001 149 Pfam Mitochondrial carrier protein 51 142 IPR018108 -
Trme46894g00001 149 Pfam Mitochondrial carrier protein 3 40 IPR018108 -
Trme46894g00001 149 PRINTS Adenine nucleotide translocator signature 24 36 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme46894g00001 149 PRINTS Adenine nucleotide translocator signature 50 63 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme46894g00001 149 Gene3D Mitochondrial carrier domain 1 148 IPR023395 -
Trme46894g00001 149 SUPERFAMILY Mitochondrial carrier 3 143 IPR023395 -
Trme46894g00001 149 PRINTS Mitochondrial carrier protein signature 115 133 IPR002067 GO:0055085
Trme46894g00001 149 PRINTS Mitochondrial carrier protein signature 65 83 IPR002067 GO:0055085
Trme46894g00001 149 PRINTS Mitochondrial carrier protein signature 13 33 IPR002067 GO:0055085
Trme46894g00001 149 ProSiteProfiles Solute carrier (Solcar) repeat profile. 50 142 IPR018108 -
Trme46894g00001 149 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 4 147 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme46894g00001 149 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 38 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46894g00001 Trme-Chr46894 68 604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46894g00001 1 149 Antiporters AT5G17400 79.866 1.61e-86 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46894g00001 K05863 - gmx:100776735 277.715