Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46876g00001 ATGACCAACAACTTCTGTTCTGGTGTTTGTGCTTCATCTGCTAGAAAATGGGACAGCCTTCAAATGGGGACCTTGAGTGATGACATGAGAGTTATGACTAGGAAAAATGTTGATGACCCCGGCGAGCCTCCCGGTATTGTGCTCAGTGCTGCTACATCTGTTTGGATGCCAGTTTCACGGCAAAGGCTGTTTGATTTTCTGCGTGATGAACGGCTTAGAAGCGAGTGGGACATTTTGTCTAATGGTGGACCAATGCAAGAGATGGTTCACATTGCAAAAGGACAAGGACAAGGAAATTGTGTTTCTCTCCTCCGTGCTAATGCTGTTAATGCGAACGATAGCAGCATGTTGATTCTGCAAGAGACATGGATGGATACATCGTGCTCTGTCGTGGTGTACGCGCCTGTTGACGGGCAATCATTGAACGTGGTGATGAGTGG 440 0.4727 MTNNFCSGVCASSARKWDSLQMGTLSDDMRVMTRKNVDDPGEPPGIVLSAATSVWMPVSRQRLFDFLRDERLRSEWDILSNGGPMQEMVHIAKGQGQGNCVSLLRANAVNANDSSMLILQETWMDTSCSVVVYAPVDGQSLNVVMSG 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46876g00001 147 SUPERFAMILY Bet v1-like 12 141 - -
Trme46876g00001 147 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 147 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46876g00001 Trme-Chr46876 10 983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46876g00001 1 147 Homeobox Transcription Factor Family AT3G61150 68.707 6.81e-68 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46876g00001 K09338 - gmx:100785102 278.485