Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46870g00001 ATGGATGCAGCTGCACCTCTACTATGTGCTGGAATAACAGTATTCAGTCCATTGAAGGATCACAATTTGGTATCATCACCGGGGAAGAAAATTGGTGTGGTTGGTTTGGGAGGACTTGGTCACATGGCTGTCAAATTTGGTAAAGCATTTGGTCACCATGTTACTGTCATAAGCACTTCTCCTTCCAAAGAAGCTGAGGCTAAAGAACGTTTGGGAGCTGATGATTTCATAATCAGCACCAATCCTGACCAATTGCAGGTTTGCTTGCTACCTTATTAG 279 0.4337 MDAAAPLLCAGITVFSPLKDHNLVSSPGKKIGVVGLGGLGHMAVKFGKAFGHHVTVISTSPSKEAEAKERLGADDFIISTNPDQLQVCLLPY 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46870g00001 92 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 85 IPR036291 -
Trme46870g00001 92 PANTHER ALDEHYDE REDUCTASE 1 86 IPR047109 GO:0016616
Trme46870g00001 92 FunFam Cinnamyl alcohol dehydrogenase 10 89 - -
Trme46870g00001 92 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 25 69 IPR006140 GO:0051287
Trme46870g00001 92 Gene3D - 10 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46870g00001 Trme-Chr46870 683 961 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46870g00001 1 86 Monolignol Biosynthesis Gene Families AT1G72680 62.791 6.09e-24 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46870g00001 K00083 - gmx:100820588 150.984