Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46809g00001 ATGGAAAAAGGTGTTTTTGTTTCCACTTCAGCAGGAAATAGTGGACCACTCCTTAAAACATTACACAACGGAACACCTTGGGTTATAACTGTGGCTGCTGGAACTATGGATAGAGATTTTTATGGGACTCTTACACTTGGAAATGGTAAAAAAATCACAGGATTGTCTTTCTATATAGGACCATTCCCTACACATAATGTTCCTATTGTTTTCATGGGTTTATGNGACAATGTTAAGGAATTGAAAAAAGTGAAGAGAAAGATTGTTGTCTGTGAAGAGAAGAATGGAACTAGCATTTTTGATCAAGTCGATTATTTGGATGCAGCAAAAGTTTTTGCAGCTGTTTTGATTTCAAATTTCAACTATCGGAAGAATAATATTGCAACCATCATTGTTGATCCAATAAATGGGGAAATTGTCAAAGCTTACATAAAGAGTTATTACAATTCTAAGCACTCTAATTCAATAGCTAGCATGTCTTTCATGAAAACAGGTTTTGGTGTTAAACCAGCACCTATCGTTGATTTTTATAGTTCAAGAGGTCCATCATCTAGTTGTCCATTTGTGTTGAAACCGGACATTACGGCGCCTGGTATTTCAATCTTAGCGGCATGGCCTACGAATGTTCCTGTGTTGAAATTTGGGCCTAAAATGTTTTTCAGCAATTTCAATTTGGTAAGTGGAACATCTATGGCATGTCCTCATATTGCAGGTGTCGCGGCACTTTTAAAAGGTGCACATGGAGATTGGAGTGCTGCAGCTATTCGATCGGCAATAATGACCACATCAGACATACTTGATAATACTAAGGAACAAATCAAAGACAATGGAACAGGTTACAAAGCAACACCTTTTGCATTAGGAGCTGGTCATGTTAATCCTAATAAAGCACTTGACCCTGGTCTTGTATATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGC 950 0.3726 MEKGVFVSTSAGNSGPLLKTLHNGTPWVITVAAGTMDRDFYGTLTLGNGKKITGLSFYIGPFPTHNVPIVFMGLXDNVKELKKVKRKIVVCEEKNGTSIFDQVDYLDAAKVFAAVLISNFNYRKNNIATIIVDPINGEIVKAYIKSYYNSKHSNSIASMSFMKTGFGVKPAPIVDFYSSRGPSSSCPFVLKPDITAPGISILAAWPTNVPVLKFGPKMFFSNFNLVSGTSMACPHIAGVAALLKGAHGDWSAAAIRSAIMTTSDILDNTKEQIKDNGTGYKATPFALGAGHVNPNKALDPGLVYDVGVQDYVNLLCA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46809g00001 317 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 317 IPR045051 -
Trme46809g00001 317 Pfam Subtilase family 2 280 IPR000209 GO:0006508|GO:0008236
Trme46809g00001 317 CDD PA_subtilisin_like 43 156 - -
Trme46809g00001 317 Gene3D - 41 164 - -
Trme46809g00001 317 ProSiteProfiles Serine proteases, subtilase domain profile. 1 298 - -
Trme46809g00001 317 SUPERFAMILY Subtilisin-like 2 302 IPR036852 GO:0004252|GO:0006508
Trme46809g00001 317 ProSitePatterns Serine proteases, subtilase family, serine active site. 228 238 IPR023828 -
Trme46809g00001 317 Gene3D Peptidase S8/S53 domain 1 302 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46809g00001 Trme-Chr46809 1 950 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46809g00001 1 316 Subtilisin-like Serine Gene Family AT5G67090 44.340 7.82e-74 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46809g00001 - - gmx:100781249 437.573