Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46804g00001 TTAACTGCTTTGCTTGCTGAGGTTGGACTGAACATCCAAGAGGCACATGCTTTTTCCACAAATGATGGTTACTCGTTAGATGTGTTTGTTGTTGAAGGATGGCCCTATGAGGAAACAGAGAAGCTAAAAGAAACTTTGGAAAAAGAAGTCTTGAAGATTGAGAGACATGAGAGGTCCAGTCAGCAATCAGTATCATCTGTTGATGAGCGTGATCAAGCAAGGATGAAAAATGAACTGGATCAATTGACAATTCCAAACGATGGGACAGATGTTTGGGAAATAGATCCGAAACATTTGAAATATGGAACTCAAATTGCATCTGCGTCATACGGTGAACT 338 0.4024 LTALLAEVGLNIQEAHAFSTNDGYSLDVFVVEGWPYEETEKLKETLEKEVLKIERHERSSQQSVSSVDERDQARMKNELDQLTIPNDGTDVWEIDPKHLKYGTQIASASYGEL 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46804g00001 113 MobiDBLite consensus disorder prediction 54 77 - -
Trme46804g00001 113 SUPERFAMILY ACT-like 1 48 IPR045865 -
Trme46804g00001 113 ProSiteProfiles ACT domain profile. 1 61 IPR002912 -
Trme46804g00001 113 Coils Coil 36 59 - -
Trme46804g00001 113 MobiDBLite consensus disorder prediction 54 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46804g00001 Trme-Chr46804 150 900 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46804g00001 1 113 MAP Kinase Kinase Kinase AT4G38470 65.217 8.02e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46804g00001 - - gmx:100805180 176.022