Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46799g00001 ATGATTGTAGCTGCGATTGATACATCCGCTACTGTAATTGAATGGGCTTTATCCGAACTTCTAAGGCATCCGAGAGTGATGAAAATCCTTCAAGATGAGATACAAAATGAAATAGGAAATAAAAGAATGGTTGAAGAGAAAGATTTAAAGATGTTAAATTACTTAGATATGGTGGTTGATGAAACGTTAAGGCTTTATCCTGTTGGACCCTTATTAGACCCTCGTGAATGTAGAGAGAGCATAACAATTAATGGATATTTTATAAAGGAAAAGACCAGAGTTATAGTAAATGCATGGGCTATAGGGAGGGATTCTAATGTTTGGTCAGAAAATGCGGAAGAATTTTATCCAGAGAGATTTATTGGCAAGAAAATGAATTATCATGGACAAGAGTTTGAATGCATACCATTTGGTTCGGGTCGTAGACGTTGTCCTGGAATTCAATTGGGGTTGATTACTATTAAGTTGGTTCTAGCTCAATTCGTGCATTGCTTTAATTGGAAACTTCCATGTAATATCGATCCTTCCAATTTGAATATGGAAGAAAAATTTGGACTCACTATACCTAGAGCTCATCCCTTGCACGCAATACCGACTTATCGTTTGGCAAGCGATGCCAACGATGAATAG 630 0.3698 MIVAAIDTSATVIEWALSELLRHPRVMKILQDEIQNEIGNKRMVEEKDLKMLNYLDMVVDETLRLYPVGPLLDPRECRESITINGYFIKEKTRVIVNAWAIGRDSNVWSENAEEFYPERFIGKKMNYHGQEFECIPFGSGRRRCPGIQLGLITIKLVLAQFVHCFNWKLPCNIDPSNLNMEEKFGLTIPRAHPLHAIPTYRLASDANDE 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46799g00001 209 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme46799g00001 209 PRINTS E-class P450 group I signature 144 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme46799g00001 209 PRINTS E-class P450 group I signature 134 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme46799g00001 209 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme46799g00001 209 SUPERFAMILY Cytochrome P450 1 201 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme46799g00001 209 Coils Coil 27 47 - -
Trme46799g00001 209 FunFam Predicted protein 2 196 - -
Trme46799g00001 209 Gene3D Cytochrome P450 1 200 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme46799g00001 209 Pfam Cytochrome P450 1 189 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme46799g00001 209 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme46799g00001 209 PRINTS P450 superfamily signature 144 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme46799g00001 209 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme46799g00001 209 PRINTS P450 superfamily signature 135 144 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme46799g00001 209 PANTHER CYTOCHROME P450 93A3-LIKE 1 203 - -
Trme46799g00001 209 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 137 146 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46799g00001 Trme-Chr46799 105 734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46799g00001 4 201 Cytochrome P450 AT2G45570 46.970 1.30e-65 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46799g00001 - K20562 vvo:131634874 333.954