Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46786g00001 ATGTCGTCGACTTTGCTGGAAGTGACTCGGTCGGCGCACGAGGAGGTGGAGCGGCTTGAGAGATTGATAGCGAAGGATCTTCAGAATGATCCCACATCCAACAAGGACCGTTTGTTTCGGAGTCACCGTGTTAGAAATATGATCGACACCATCAGCTCGACCACTGAAAGGCTGGTTGAGATATATGACGACAAAGACAATGCAAGGAAGGACGAGATTGCTGCACTGGGAGGACAAACTGCTACTGGAATTAATGTTTTCAGTGCCTTCTATGATAGACTCAAAGAGATACGAGAGTATCATAGGAAGCACCCAGTTGCACGTGTTGTTGATGCCAATGACGATTTTGAAGCCCTTCTTAAAGAGGAACCTCAAATTGAGTTCAGCGGAGAGGTACTCTCTCTCTCTCTCTCTCTCTCCACTTGTGCATGTGTAATCACCACTCACTGGTGA 453 0.4724 MSSTLLEVTRSAHEEVERLERLIAKDLQNDPTSNKDRLFRSHRVRNMIDTISSTTERLVEIYDDKDNARKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPVARVVDANDDFEALLKEEPQIEFSGEVLSLSLSLSTCACVITTHW 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46786g00001 150 PANTHER SPLICING FACTOR SF3A-RELATED 4 104 - -
Trme46786g00001 150 Pfam Splicing factor SF3a60 binding domain 81 105 IPR021966 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46786g00001 1 131 C2H2 Transcription Factor Family AT5G06160 73.282 7.75e-63 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46786g00001 K12827 - qsu:112017984 226.868