Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46761g00001 ATGAAGATGAAGAAGATTCATTTCAGCAAGATCTATTCATTTAAATTTGGTAAAAAAACAAAGTTTAGAAGAGAGCATTCACAGATTGGAAGACAAGGGTATTCTAGAGTTGTTTTATGCAATGAATTACAAGATAGTTTTGAATCAGATTTGATTAGGAATTATGCTGATAATTCTGTTAGGTCAACTAAATATACTGTTGCGAGTTTCTTCCCAAAGTCATTGTTTGAGCAGTTTAGGAGGATAGCTAATTTCTATTTCCTTGTTGTTGGTATCTTAGCTTTCACAAAACTTGCTCCTTATACTGCTGTTAGTGCTATTCTTCCTTTATGTATTATCGTTGGAGCAACTATGGTGAAAGAAGGTATTGAAGATTTGCGTCGGAAAAAACAG 393 0.3308 MKMKKIHFSKIYSFKFGKKTKFRREHSQIGRQGYSRVVLCNELQDSFESDLIRNYADNSVRSTKYTVASFFPKSLFEQFRRIANFYFLVVGILAFTKLAPYTAVSAILPLCIIVGATMVKEGIEDLRRKKQ 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46761g00001 131 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 31 131 - -
Trme46761g00001 131 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 131 IPR023298 -
Trme46761g00001 131 Pfam Phospholipid-translocating ATPase N-terminal 52 106 IPR032631 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46761g00001 6 131 Primary Pumps ATPases AT3G25610 65.873 5.33e-50 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46761g00001 K01530 - lja:Lj0g3v0116069.2 187.963