Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme4673g00001 ATGTTTGATAAAGTCCTGAAAGAAAAAACTCCTAAGTTTTTGCTTTGTCTGCTTCCTGAGGACTCTAATATATATGGTCCATGGAAGAAGGCATGTCTTGCTGAACATGGAATTTTTACACAGTGCATAGCTCCTCCAAAAAAGAAGACCGTAAACAAGCGGTATCTGGCAAATGTTTTGTTGAAGATAAATGTTAAGCTTGGTGGAATGAATTCTCTGTTGGCTAAAGAACTTTCTGAAGTTATCCCTATCGTATCCCAAGCTCCCACTCTCATTTTGGGCATGGATGTTTCTCATGGTTCACCCGGGCAAACTGACATTCCTTCAATTGCTGCGGTTGTAAGCTCAAGACAATGGCCAAAAATGTCTAAATATAGGGCATGGTTCCGAACCCAGAAGTCAAAGGTGGAAATGATAGAAGAACTGTTCAAGTTGGTGGATGATAAGGATGAAGGACTTATAAGACAAGCTTTGGATGATTTCTATGAAACTTCTAAGCAAAATAGGCCCGAAAACATTATCATTTTCAGGGATGGTGTCAGCGATTCCCAGTTTAACCAAGTGTTGGACAAGGAACTGACACAAATCATTGAGGCCTGTCAATTTTGGGATAAAGACTGGCACCCGAAATTTTTGGTGATTGTTGCACAGAAGAATCATCACACAAGATTTTTCCAGACTGGAAATCCCGCCGAAAATGCGCCTCCTG 709 0.409 MFDKVLKEKTPKFLLCLLPEDSNIYGPWKKACLAEHGIFTQCIAPPKKKTVNKRYLANVLLKINVKLGGMNSLLAKELSEVIPIVSQAPTLILGMDVSHGSPGQTDIPSIAAVVSSRQWPKMSKYRAWFRTQKSKVEMIEELFKLVDDKDEGLIRQALDDFYETSKQNRPENIIIFRDGVSDSQFNQVLDKELTQIIEACQFWDKDWHPKFLVIVAQKNHHTRFFQTGNPAENAPP 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme4673g00001 236 Gene3D - 1 79 - -
Trme4673g00001 236 Gene3D - 81 236 IPR036397 GO:0003676
Trme4673g00001 236 SMART Piwi_a_2 13 236 IPR003165 GO:0003676
Trme4673g00001 236 SUPERFAMILY Ribonuclease H-like 7 236 IPR012337 -
Trme4673g00001 236 ProSiteProfiles Piwi domain profile. 13 236 IPR003165 GO:0003676
Trme4673g00001 236 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 6 229 - -
Trme4673g00001 236 Pfam Piwi domain 14 231 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme4673g00001 Trme-Chr4673 105 1631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme4673g00001 7 234 Eukaryotic Initiation Factors Gene Family AT5G43810 41.026 8.96e-51 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme4673g00001 K11593 - gmx:100779439 311.227