Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46685g00001 AAATATGTTAGTACTCATGATGTTGGTTACTGGGCTCGTAGCTTCTTGCAAGATTTGGAAAGGACTTGTAGCGATCATGCAAGACGAAGGTGGTGGGGAATTGGTTTTGGATTAAGTTTTAGAGTTGTAGCACTTGATCCTAACTTCAAGAAGCTCTCAATGGAGCACATTGTTTCTGCTTACAAGCGGACAAAAACTAGGGCCATCCTTCTAGATTATGATGGTACACTAATGCCCCAGGCTTCCATTGATAAGAGCCCAACCAGTAATTCCATTAAAATGCTTAATAGTTTGTGTAGAGATGAGAACAACATGGTGTTTCTAGTCAGTGCTAAAAGCCGTAAGACGCTTGCTGAATGGTTTTCTCCTTGTGAAAATCTGGGAATTGCCGCCGAGCATGGTTACTTTTTAAGACTGAAGCGGGATGCAGAATGGGAAACATGTGCTCCTGTAACAGACTCCAGTTGGAAACTAATTGCTGAGCCTGTGATGAAGCTTTACACTGAAACAACAGACGGATCAACTATAGAAGATAAGGAAACGGCACTTGTTTGGTGCTATGAGGATGCAGATCCAGATTTTGGATCATGCCAAGCTAAAGAACTTCTTAATCATCTTGAAAGTGTGCTTACAAATGAACCAGTAACAGTGAAGAGTGGACTAAATCATGTGGAGGTTAAACCACAG 687 0.4163 KYVSTHDVGYWARSFLQDLERTCSDHARRRWWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTKTRAILLDYDGTLMPQASIDKSPTSNSIKMLNSLCRDENNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFLRLKRDAEWETCAPVTDSSWKLIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLNHLESVLTNEPVTVKSGLNHVEVKPQ 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46685g00001 229 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 228 IPR001830 GO:0003824|GO:0005992
Trme46685g00001 229 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 66 183 - -
Trme46685g00001 229 Gene3D - 66 220 IPR023214 -
Trme46685g00001 229 Pfam Trehalose-phosphatase 70 229 IPR003337 GO:0003824|GO:0005992
Trme46685g00001 229 SUPERFAMILY HAD-like 67 229 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46685g00001 Trme-Chr46685 3 949 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46685g00001 1 229 Trehalose Biosynthesis Gene Families AT1G68020 81.659 2.87e-136 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46685g00001 K16055 - qsa:O6P43_032475 428.713