Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46654g00001 ATGGAAGAATTAGAGAAGCTTCTGAATTTGGACTCAAATAATAATGATGTYCGAGTTGTTGGGATTTGTGGAATGGGTGGAATAGGGAAGACAACTCTTGCTACTGCTTTGTATGCTAGAATCTCTAATCAATTTGATGCTTGCTGCTTTATTGATGAT 159 0.3648 MEELEKLLNLDSNNNDVRVVGICGMGGIGKTTLATALYARISNQFDACCFIDD 53
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46654g00001 53 Gene3D - 1 53 IPR027417 -
Trme46654g00001 53 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 53 IPR044974 GO:0006952
Trme46654g00001 53 Pfam NB-ARC domain 5 49 IPR002182 GO:0043531
Trme46654g00001 53 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 52 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46654g00001 Trme-Chr46654 354 512 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46654g00001 3 53 WRKY Transcription Factor Family AT5G45050 54.902 9.94e-13 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46654g00001 - - psat:127106907 95.1301