Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46636g00001 TTGAATCAAGAGTGCTCAATGGAAAGCCAAGACCCACCAAATCCACCACCACCATTAATGATGCCGCCGCCGCCACCACCACCTCAAAACAACACCTTCTTTACTCCTTTACAAAATTACCCTTTGGAATCTCAAGATCAATGTCTTGGTGATATTGATTGGGGTAATTTTTTCTTAGGTCAAAATAATAATAACAACTTACTTGTTGGGGATGCTAAGGAGACATTAATGGATAATATTCAATGCACATCTTCTTCTTCTAATTTGTTGGTGAATAATAATGAAAGTGGGAGTTATCAATTGCATGAGGTAGAAAAAGGAAACAAAGAGGAGAAAAGGATTAAAGGTGGGAGATTGAAGAAGACAACAAAAGTACCAAGGTTTGCATTTCAGACAAGAAGTGTTGATGATATTTTGGATGATGGTTATCGTTGGAGGAAATATGGACAAAAAGCTGTCAAGAATAGCACATATCCCAG 479 0.3758 MNQECSMESQDPPNPPPPLMMPPPPPPPQNNTFFTPLQNYPLESQDQCLGDIDWGNFFLGQNNNNNLLVGDAKETLMDNIQCTSSSSNLLVNNNESGSYQLHEVEKGNKEEKRIKGGRLKKTTKVPRFAFQTRSVDDILDDGYRWRKYGQKAVKNSTYP 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46636g00001 159 ProSiteProfiles WRKY domain profile. 134 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trme46636g00001 159 MobiDBLite consensus disorder prediction 1 31 - -
Trme46636g00001 159 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 48 159 IPR044810 GO:0003700
Trme46636g00001 159 Pfam WRKY DNA -binding domain 140 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trme46636g00001 159 Gene3D WRKY domain 126 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trme46636g00001 159 MobiDBLite consensus disorder prediction 10 31 - -
Trme46636g00001 159 SUPERFAMILY WRKY DNA-binding domain 133 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46636g00001 Trme-Chr46636 3 481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46636g00001 115 159 WRKY Transcription Factor Family AT5G41570 65.957 1.14e-15 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trme46636g00001 WRKY 2.7e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46636g00001 - - cam:101497701 144.05