Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme466209g00001 ATGGCGGTGAATCTCACGGCGAACGCTATTCCGGCGATAATCAACGGCGACGTTGACGCGAAACCGTTGGTTCAAGTTCTCGACATTGCAACAATCCAAAGTACCAAAAACTCTCAGACAGAGAGATTCCGTCTTCTTCTTTCCGACTCCGTTTCATCTCACCACGCCATGCTCGCTGCTCAACTCAACGAGAAAGTCAAAACCGGCCGTTTTAAGAAAGGAAC 224 0.4911 MAVNLTANAIPAIINGDVDAKPLVQVLDIATIQSTKNSQTERFRLLLSDSVSSHHAMLAAQLNEKVKTGRFKKGT 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme466209g00001 75 Pfam Replication factor-A protein 1, N-terminal domain 5 74 IPR007199 GO:0003677|GO:0005634|GO:0006260
Trme466209g00001 75 SUPERFAMILY Nucleic acid-binding proteins 1 74 IPR012340 -
Trme466209g00001 75 Gene3D - 3 75 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme466209g00001 Trme-Chr466209 1 224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme466209g00001 1 75 Core DNA Replication Machinery Family AT4G19130 41.772 1.88e-13 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme466209g00001 K07466 - gmx:100792409 105.145