Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46577g00001 AAACTAATTGGAGCAAGATATTTCAACAAAGGCTATGCATCAAGAGTAACCACCCCATTAAACTCAACCTTTGAGACACCTCGTGACAATGAAGGCCATGGATCACACACTCTTTCAACAGCAGGTGGAAACATGGTACAAGGTGTAAGTGTCTTTGGTCAAGGAAATGGAACAGCAAAGGGTGGTTCACCAAGAGCAAGAGTTGCATCATACAAAGTTTGTTGGCCTCCAGTTAATGGCGATGAATGTTTTGATGCAGACATACTTGCAGCTTTTGATATGGCTATCCATGATGGTGTTGATGTCTTGTCTTTGTCACTTGGTGGTTCTGCTTCTAACCTTTTCAATGATAGTGTTGCTATTGGATCTTTTCATGCTGCTAAGAAAGGTATTGTTGTTGTTTGTTCTGCTGGTAATAGTGGACCAAATGAAGCTACTGCAGAAAATCTAGCTCCTTGGTATATTACAGTTGGTGCTAGCACAATGGATAGAGAGTTTCCTAGTTATGTTGTTCTTGGTAACAATTTAAGGCTCAAGTCGGCCATATCTGGACTATTTGATTAA 564 0.4043 KLIGARYFNKGYASRVTTPLNSTFETPRDNEGHGSHTLSTAGGNMVQGVSVFGQGNGTAKGGSPRARVASYKVCWPPVNGDECFDADILAAFDMAIHDGVDVLSLSLGGSASNLFNDSVAIGSFHAAKKGIVVVCSAGNSGPNEATAENLAPWYITVGASTMDREFPSYVVLGNNLRLKSAISGLFD 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46577g00001 187 ProSiteProfiles Serine proteases, subtilase domain profile. 1 187 - -
Trme46577g00001 187 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 175 IPR045051 -
Trme46577g00001 187 SUPERFAMILY Subtilisin-like 8 176 IPR036852 GO:0004252|GO:0006508
Trme46577g00001 187 Gene3D Peptidase S8/S53 domain 1 183 IPR036852 GO:0004252|GO:0006508
Trme46577g00001 187 MobiDBLite consensus disorder prediction 20 40 - -
Trme46577g00001 187 Pfam Subtilase family 24 175 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46577g00001 Trme-Chr46577 143 807 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46577g00001 1 179 Subtilisin-like Serine Gene Family AT2G04160 75.419 1.25e-90 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46577g00001 - - gmx:100794807 291.197