Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46531g00001 AAAGGATTCTTGGCGAAATATTCAAACATTAGTAGAACAATTGTTAACACGACACGTGACACATTCGGTCATGGGACTCACACTTCATCAATAGCTGCTGGAAGTAGAGTAGATGGTGCATCTTTCTTTGGTTTAGGAAATGGAACAGCAACGGGAATAGCTTCATTGTCTAGAGTAGCCATTTACAAGGTTGCATGGGGAACAAATGCAGGTATAGTTGTATCTGATGTAATAGCTGCAATTGATGCCGCGATATCAGATGGTGTTGATGTTCTTTCAATGTCATTTAACTATGACAGTGTGCCTCTGTATAAAGATGGTATTGCCATAGCAACATTTGCAGCTATGGAAAAAGGTGTTTTTGTGACTACTTCAGCAGGTAATGATGGACCTTCCTTTAAAACTATAAACAATGGAACACCATGGGCGACAATTGTTGCTGCTGGTACTTTAGATCGCGACTTTCATGGAAATATTACACTTGGTAATGGAGTATCGGTCACTGGCTTCTCTTGTTATCCTGGTAAATTCTCCACTAGCAATTTTCCAATTGTTTTCATGGGTATGTGTGACAATGTTAAAAAACTAATCAAAGTAAAGAGCAAGATTGTGGTTTGTGAATTTAAGAATGGAACTTCTCCTAATCTTGTTAAACCAATTCAGAATTTAATTGCAGCTAAAGTTGTTGGAAGTGTTCTCATAACAAACATAATACAAATTGATGAATTTTCATTCTCTAGTGCGATCCCATTCCCATCTATCATTATTAACCCCAAAAATGGAGAGATTGTCAAAGATTTCATCAAGAGAACCTCTTACTCAAGTTCAATAGCAAAAATGTCTTTCAAGATAACATCTTTTGATGTTAGACCAGCGCCTAGTGTCGATTTTTATAGTTCAAGAGGACCTTCAAAGAATTGTCCATATGTTTTGAAACCCGACATTACAGCTCCTG 955 0.3717 KGFLAKYSNISRTIVNTTRDTFGHGTHTSSIAAGSRVDGASFFGLGNGTATGIASLSRVAIYKVAWGTNAGIVVSDVIAAIDAAISDGVDVLSMSFNYDSVPLYKDGIAIATFAAMEKGVFVTTSAGNDGPSFKTINNGTPWATIVAAGTLDRDFHGNITLGNGVSVTGFSCYPGKFSTSNFPIVFMGMCDNVKKLIKVKSKIVVCEFKNGTSPNLVKPIQNLIAAKVVGSVLITNIIQIDEFSFSSAIPFPSIIINPKNGEIVKDFIKRTSYSSSIAKMSFKITSFDVRPAPSVDFYSSRGPSKNCPYVLKPDITAP 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46531g00001 318 ProSiteProfiles Serine proteases, subtilase domain profile. 1 318 - -
Trme46531g00001 318 CDD PA_subtilisin_like 158 272 - -
Trme46531g00001 318 Gene3D - 156 285 - -
Trme46531g00001 318 Pfam Subtilase family 17 318 IPR000209 GO:0006508|GO:0008236
Trme46531g00001 318 SUPERFAMILY Subtilisin-like 14 318 IPR036852 GO:0004252|GO:0006508
Trme46531g00001 318 Gene3D Peptidase S8/S53 domain 5 318 IPR036852 GO:0004252|GO:0006508
Trme46531g00001 318 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 11 318 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46531g00001 Trme-Chr46531 33 987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46531g00001 1 318 Subtilisin-like Serine Gene Family AT5G67090 39.640 1.85e-64 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46531g00001 - - lja:Lj0g3v0171039.1 355.91