Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46467g00001 AAATATGCAGCTGTTAAGGTGCAGTTTAAAGATGGCACCCCATATGAGGTTATTGAACGCAAAGGTCTTGATATTGTCCGCCGTGACTGGAGCTTATTAGCGAAAGATTTAGGAGATTTTTGCTTGACGCAAATTTTGTCGGGAGGGTCATGCGAAGATGTCGTCGAATCAATTCACAACTCTCTCATGAAGGTACAAGAAGAAATGAGGAACGGACAAGTAGCACTAGAAAAATATGTCATCACAAAGACATTGACAAAACCACCCGAAGCATATCCTGATGCCAAAAACCAGCCACATGTTCTTGTGGCACAAAGATTGAAGCAACAAGGTTACACCTCTGGTTGCTCTGTTGG 356 0.427 KYAAVKVQFKDGTPYEVIERKGLDIVRRDWSLLAKDLGDFCLTQILSGGSCEDVVESIHNSLMKVQEEMRNGQVALEKYVITKTLTKPPEAYPDAKNQPHVLVAQRLKQQGYTSGCSVG 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46467g00001 119 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 1 119 - -
Trme46467g00001 119 Gene3D - 23 119 IPR042087 -
Trme46467g00001 119 SUPERFAMILY DNA/RNA polymerases 2 114 IPR043502 -
Trme46467g00001 119 Pfam DNA polymerase family B 1 113 IPR006134 GO:0000166|GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46467g00001 1 115 Core DNA Replication Machinery Family AT5G67100 76.522 5.45e-59 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46467g00001 K02320 - gmx:100798779 232.261