Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46371g00001 ATGGCTACTATGGTTTGGTTTCAGTGTGTTTTTGCTGCAATTGCATTAGTTATATTGGCTGGTTCTGTTTTGGCTAGGATGAGTTTTAAGGCATGGATGATGTTTGTGCCACTTTGGTTAACTTTTTCTTATACTGTTGGTGCTTTTAGTGTGTGGGGTGGTGGATTCTTGTTTCAATGGGGTGTTATGGATTATTCTGGTGGTTATGTTATTCATCTTTCTTCTGGGATTGCTGGTTTCACTGCTGCTTATTGG 255 0.3961 MATMVWFQCVFAAIALVILAGSVLARMSFKAWMMFVPLWLTFSYTVGAFSVWGGGFLFQWGVMDYSGGYVIHLSSGIAGFTAAYW 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46371g00001 85 PANTHER AMMONIUM TRANSPORTER MEP2 1 85 IPR001905 GO:0008519|GO:0016020|GO:0072488
Trme46371g00001 85 SUPERFAMILY Ammonium transporter 3 85 - -
Trme46371g00001 85 Pfam Ammonium Transporter Family 4 84 IPR024041 GO:0008519|GO:0016020|GO:0072488
Trme46371g00001 85 Gene3D Ammonium transporter AmtB like domains 1 85 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46371g00001 Trme-Chr46371 589 843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46371g00001 1 85 Inorganic Solute Cotransporters AT2G38290 76.471 4.06e-42 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46371g00001 K03320 - gmx:100785993 174.481