Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46339g00001 ATGGCGCACATTGCAAATGGACGAGATACCGGAAATTGTGTGTCTCTCCTAAGAGTTAATAGTGCAAATTCAAGCCAGAGCAACATGTTAATATTACAAGAGAGTCTAACTGATTCAACAGGTTCATTTGTGATATATGCACCAGTCGACATAGTTGCTATGAATGTAGTTCTAAATGGAGGAGATCCAGATTATGTAGCACTTCTTCCATCCGGATTCGCTATCCTTCCTGATGGAAATGCAATCGGAAATGGCGAAAATGGAGGACAAGTTGCTGGTGGCGGCGGCGGTGGTGGTGGAGGATCACTTTTGACTGTTGCATTTCAAATATTGGTTGATTCTGTTCCAACTGCTAAACTTTCTCTTGGATCTGTTGCTACTGTTAATAGTCTTATTGCTTGTACTGTTGAGAGAATCAAAGCTTCTTTGTCTGGTGAAGGTGCTGCTTGA 450 0.42 MAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESLTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGNAIGNGENGGQVAGGGGGGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKASLSGEGAA 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46339g00001 149 SUPERFAMILY Bet v1-like 3 140 - -
Trme46339g00001 149 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 143 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46339g00001 Trme-Chr46339 216 951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46339g00001 1 148 Homeobox Transcription Factor Family AT1G05230 84.459 1.40e-77 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46339g00001 K09338 - egr:104439742 229.18