Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46286g00001 GAATTTAAGGAGTTGATCACAGATGTCCTTGGGGTAGAAGTTTTCACGCCGGAAGATTCTTATAGTTTTTTTTCTGGAACTTACTGTGCCTTGTCTAACATAGGTGGTTTGATCCACCCTAGTGCTTCCAAAAAAGTCTTGGATGAACTTTCTGCAGCTCTTGAAGTTCCTTTGGTACCTGGGACCGTCAATCGGGGCAGCGTTGCTATAAATCCCGGCATGACAGTAAATGATTGGACAGCCTTTTGTGGTTCAAGCACCACAAAAGCAGAGCTCTGTGTGATTGATAGAGCTTTCAAGCTGAGGGAACCCTAG 315 0.4476 EFKELITDVLGVEVFTPEDSYSFFSGTYCALSNIGGLIHPSASKKVLDELSAALEVPLVPGTVNRGSVAINPGMTVNDWTAFCGSSTTKAELCVIDRAFKLREP 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46286g00001 104 SUPERFAMILY Pentein 2 101 - -
Trme46286g00001 104 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 3 103 IPR002769 GO:0042256|GO:0043022
Trme46286g00001 104 Gene3D - 1 102 - -
Trme46286g00001 104 Pfam eIF-6 family 2 80 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46286g00001 Trme-Chr46286 375 778 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46286g00001 1 103 Eukaryotic Initiation Factors Gene Family AT3G55620 62.136 8.90e-40 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46286g00001 K03264 - pda:103709397 130.183