Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46250g00001 TGGAAAAAAGCTCTCATTTATGAATTAATGTCTAATGGTTCTCTTGACAAATTTATTTACAATAAGGGACCTGAAACCATTTCATCTTTGAGTTGGGAGATTCTTTATCAAATTGCTAAGGGGATAGCACGAGGGTTGGAGTATCTGCATAGGGGATGTAGCACTCGTATTTTACATTTTGACATCAAACCACATAATATTCTCTTGGATGAGAATTTTTGTCCAAAGATATCAGATTTTGGGCTCGCAAGACTTTGTCCAAAGAAAGAGAGCAATATTTCGATGTCGGATGCTAGAGGTACCGTGGGATATGTAGCTCCTGAGTTGTGGAATAGAAATTTTGGAAGAGTTTCACACAAATCTGATGTTTATAGTTATGGAATGATGTTGTTGGAAATGGTTGGAGGGAGGAAAAACCTTCACGCTAATGCAACTGACACAAGTGAGATATACTTTCCTCATTGGGTATATAATAGACTTGATCTAGGTGGTGATTTAAGACCTGGTGAAGTCATTGCCGCGGAAGAAGATGAGATCGCAAAGAGAATGACTATTGTAGGTTTATGGTGTATTCAAACATTTCCAAATGACCGACCTACAATGAGTAGA 609 0.3793 WKKALIYELMSNGSLDKFIYNKGPETISSLSWEILYQIAKGIARGLEYLHRGCSTRILHFDIKPHNILLDENFCPKISDFGLARLCPKKESNISMSDARGTVGYVAPELWNRNFGRVSHKSDVYSYGMMLLEMVGGRKNLHANATDTSEIYFPHWVYNRLDLGGDLRPGEVIAAEEDEIAKRMTIVGLWCIQTFPNDRPTMSR 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46250g00001 203 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme46250g00001 203 SUPERFAMILY Protein kinase-like (PK-like) 4 202 IPR011009 -
Trme46250g00001 203 FunFam PR5-like receptor kinase 10 203 - -
Trme46250g00001 203 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 203 IPR045874 GO:0004672
Trme46250g00001 203 ProSitePatterns Serine/Threonine protein kinases active-site signature. 57 69 IPR008271 GO:0004672|GO:0006468
Trme46250g00001 203 SMART serkin_6 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme46250g00001 203 Gene3D Transferase(Phosphotransferase) domain 1 1 203 - -
Trme46250g00001 203 Pfam Protein kinase domain 5 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46250g00001 Trme-Chr46250 375 983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46250g00001 2 203 Receptor kinase-like Gene Family AT4G18250 59.615 1.20e-80 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trme46250g00001 Pkinase 2.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46250g00001 - - tpra:123924581 380.178