Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46248g00001 ATGGCCGCCACAACCACCACCAGTCTAGGCGGAGCTACTGGCGGCGGAGACGATCGAGTTCTCGCAACAGCTCAACAGATCTTAAAAAGCCTTAAAGCTCCAAAAGAAGATCGTGAAGACATGCTCTTAATCTTCTCCACCTTCGATAATCGTCTCTCCGGCATCACTGACCTAATCAACGGCGACGATTCAAAATCCTCCGATGATGTCGATGATGATGACGAAGACCTTGACCGTTTCGAAGCCGCCGAGAAAGTCATACTCGTTGACGCTTCAATCTACACCGAGCCGTCGCGTCAATCCACTTCGCTATTCGATCCTCCGAATGATCCGGTAGAGTATTTCACCGCTGTTGATGAGATTATTCAGTGGATGGAACACTTTACGATTGCGCCGCCGCATCAATCGGCTGGGAAAACCGGTCAGATCATTTTGGACCGTGCTGAGAACGCGATCCAGCTTGCTATGTCGAGGCTTGAAGATGAGCTTCGTCATGTGTTGATTTGTAACACCGTTCCGCCGGATTCTGTTAGCCGNNNNNNNNNNANNNGGAGGAGTTCGTTATCTTTCAGTTTGCACGACGGTGCGATTGATGATAATTCTAGCAGCTTTGGTGATGTAAGTGATCCTGGTTCTCATCGGTTTCATGAACGTGGTGTTAGTCTTGGAGATGATTTGTTTGTTGATTTGGTTCGGCCGGAATCGATTATGAATCTGAAAGATATTATTGATCGTATGGTTAGGTCTGGTTATGAGAGGGAG 762 0.4711 MAATTTTSLGGATGGGDDRVLATAQQILKSLKAPKEDREDMLLIFSTFDNRLSGITDLINGDDSKSSDDVDDDDEDLDRFEAAEKVILVDASIYTEPSRQSTSLFDPPNDPVEYFTAVDEIIQWMEHFTIAPPHQSAGKTGQIILDRAENAIQLAMSRLEDELRHVLICNTVPPDSVSRXXXXXRSSLSFSLHDGAIDDNSSSFGDVSDPGSHRFHERGVSLGDDLFVDLVRPESIMNLKDIIDRMVRSGYERE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46248g00001 254 Coils Coil 145 165 - -
Trme46248g00001 254 Gene3D Exocyst complex component Exo70 81 254 - -
Trme46248g00001 254 PANTHER EXOCYST COMPLEX PROTEIN EXO70 77 254 IPR004140 GO:0000145|GO:0006887
Trme46248g00001 254 SUPERFAMILY Cullin repeat-like 108 253 IPR016159 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46248g00001 18 254 EXO70 exocyst subunit family AT5G50380 44.094 3.52e-49 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46248g00001 K07195 - gmx:100809716 331.643