Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46243g00001 AGAAAAGAAGAAGATATGCGTGCACAAAAGAAAATGGCTGATGGGCAGATGGAGGAATTATCACAGAATGAATACAAACGAGGCATTAGTGGATGGAACTTCAATCTTGAAGATATGAAGGCTCAGGCTTCCTTGATCAACGATTTTGACGATGCTATATCCGATATTAATCATGTGGGAAGTTCAAGTTCCTTATCCAATCTTGATGCGCCGCAAGATAAGCAACAGCCAAGTTCAAGTCACTGCCGTTCTCAAACTGTTGACATGTTGATTCTTCCTTCTTTATTTCCTTTCTCTTATTTTTCATTGCTAACAAGATAG 321 0.3894 RKEEDMRAQKKMADGQMEELSQNEYKRGISGWNFNLEDMKAQASLINDFDDAISDINHVGSSSSLSNLDAPQDKQQPSSSHCRSQTVDMLILPSLFPFSYFSLLTR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46243g00001 106 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 2 79 IPR047173 GO:0043539
Trme46243g00001 106 MobiDBLite consensus disorder prediction 60 84 - -
Trme46243g00001 106 MobiDBLite consensus disorder prediction 1 20 - -
Trme46243g00001 106 Coils Coil 3 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46243g00001 Trme-Chr46243 124 917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46243g00001 1 75 MAP Kinase Kinase Kinase Kinase AT1G79640 72.000 9.80e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46243g00001 K08835 - gmx:100780339 137.887