Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46176g00001 GGTAAATCTATTGAAGAAAGGGAAATTGATTCTTTGCTTGTTCAACCGGGTGACACATTGAAAGTTCTTCCTGGTACGAAGATTCCTGCTGATGGTATTGTTACTTGGGGCTCAAGTTATGTAAATGAAAGCATGGTAACTGGTGAGTCTGTCCCTGTGTTGAAGGAGGTGAATGTTTCAGTTATTGGGGGTACAATAAATTTGCATGGAGTACTTCACATTAAAGCTACCAAAATAGGATCTGATACAGTTTTGAGTCAGATAATAAGTTTGGTTGAAACAGCACAGATGTCCAAAGCTCCCATTCAGAAGTTTGCTGATTATGTAAGTAACGGTTTTTGA 342 0.386 GKSIEEREIDSLLVQPGDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESVPVLKEVNVSVIGGTINLHGVLHIKATKIGSDTVLSQIISLVETAQMSKAPIQKFADYVSNGF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46176g00001 113 Gene3D - 1 96 - -
Trme46176g00001 113 FunFam Copper-transporting ATPase 1, putative 1 96 - -
Trme46176g00001 113 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 113 - -
Trme46176g00001 113 SUPERFAMILY Calcium ATPase, transduction domain A 6 92 IPR008250 -
Trme46176g00001 113 Pfam E1-E2 ATPase 5 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46176g00001 Trme-Chr46176 124 465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46176g00001 1 113 Primary Pumps ATPases AT5G44790 81.416 3.31e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46176g00001 K17686 - gmx:100798969 204.527