Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46166g00001 ATGATGGCTGCCATGAAGAAAGAAACCAATCCCAACGTTGCCATGGCTGTCGATATATGGAGCTTAGGATGCACCATCATCGAAATGCTGACAGGAAAACCCCCTTGGAGCGAGTTTCCAGGGCATCAAGCCATGTTCAAGGTACTGCACAGATCCCCGGACATACCCAAAACTTTATCCCCAGAAGGACAGGATTTCCTTGAGCAGTGTTTCCGAAGGAATCCTGCAGAACGACCATCTGCAGCGGTGCTTCTGACACATGCCTTTGTGCAAAATTTGCATGATCAAGATATTATAGTTCATTCACAAGTATGTCATAAAGAAGACACCATAGTTCATTCACAAGGATGTCATAAAGAAGACATTGGACCCAAAGATGAACCGCGTAAACACAGTCCAGGACACAGTTCAAAACATAGCCGTGGTGTAGGGCCAGCTTCCTTTCGTGCACGA 453 0.4636 MMAAMKKETNPNVAMAVDIWSLGCTIIEMLTGKPPWSEFPGHQAMFKVLHRSPDIPKTLSPEGQDFLEQCFRRNPAERPSAAVLLTHAFVQNLHDQDIIVHSQVCHKEDTIVHSQGCHKEDIGPKDEPRKHSPGHSSKHSRGVGPASFRAR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46166g00001 151 Gene3D Transferase(Phosphotransferase) domain 1 4 118 - -
Trme46166g00001 151 MobiDBLite consensus disorder prediction 115 133 - -
Trme46166g00001 151 SUPERFAMILY Protein kinase-like (PK-like) 14 116 IPR011009 -
Trme46166g00001 151 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 13 100 - -
Trme46166g00001 151 ProSiteProfiles Protein kinase domain profile. 1 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme46166g00001 151 MobiDBLite consensus disorder prediction 115 151 - -
Trme46166g00001 151 Pfam Protein kinase domain 14 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46166g00001 Trme-Chr46166 1 958 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46166g00001 1 92 MAP Kinase Kinase Kinase AT5G66850 67.391 3.73e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trme46166g00001 Pkinase 3.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46166g00001 - K04420 lja:Lj5g3v0066680.2 227.639