Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46164g00001 ACGTACACGGCCACCCCTAACCAAACGCTTTGTGACATCATTCTTCTTTCTTGGATTAACTGGGTAAGGATATTTGGAAATCATCTTTTATTTCTTATTGGTTTGAGCTATACTAATCCAACTTATGCTGCTGCAATTCAGCCAGCTACTCCAGTCTTTACATTTGTTTTGGCTATAATGATGGGTACAGAAAGAGTGAACTTGCTAAGATATGAAGGTCTGGCCAAGGTTGGAGGAATTCTTGTCTGTGTTTTGGGTGCCTTGGTGATGGTTTTGTACCGTGGTCCAGCACTGATAGGATATTCAGAAATGGACCTTATATCGCACAGTGAAATAAGTGCAAGAGGTCAACCAGAGCCTTCTGGATGGAAACTGCATGTGCATGGCTACTTTTCTATCCATTCAGGTACATATCTTTTTTATGCACTTTAA 432 0.4074 TYTATPNQTLCDIILLSWINWVRIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFVLAIMMGTERVNLLRYEGLAKVGGILVCVLGALVMVLYRGPALIGYSEMDLISHSEISARGQPEPSGWKLHVHGYFSIHSGTYLFYAL 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46164g00001 143 PANTHER WAT1-RELATED PROTEIN 21 113 IPR030184 GO:0016020|GO:0022857
Trme46164g00001 143 SUPERFAMILY Multidrug resistance efflux transporter EmrE 13 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46164g00001 Trme-Chr46164 171 942 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46164g00001 24 111 Nodulin-like Gene Family AT3G45870 68.182 5.98e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46164g00001 - - gmx:100809051 186.808