Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46158g00001 GAATTAAAAGGAAATATCCGTGTATTCTGCCGCGTCCGACCGTTGCTAGCTGATGATGGTCATGCAGCAGATATGGTTGTTTCATTCCCTTCATCAACAGAAGCTCTAGGCCGGGGTGTGGAATTAGCACAGAATGGGCAGAAGTATTCTTTTACATTTGACAAAGTATTTAACCACAAGGCTTCACAGGAGCATGTTTTCACAGAGATTTCTCAGTTGGTACAAAGTGCCCTTGATGGGTACAAGATTCTGATAATTCTATAA 264 0.4205 ELKGNIRVFCRVRPLLADDGHAADMVVSFPSSTEALGRGVELAQNGQKYSFTFDKVFNHKASQEHVFTEISQLVQSALDGYKILIIL 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46158g00001 87 Gene3D Kinesin motor domain 1 87 IPR036961 -
Trme46158g00001 87 ProSiteProfiles Kinesin motor domain profile. 5 87 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme46158g00001 87 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 83 IPR027640 GO:0003777|GO:0007018
Trme46158g00001 87 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 86 IPR027417 -
Trme46158g00001 87 Pfam Microtubule binding 1 86 IPR031852 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46158g00001 Trme-Chr46158 320 984 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46158g00001 1 85 Calmodulin-binding Proteins AT5G65930 34.091 4.36e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46158g00001 K10405 - gmx:100818473 145.206