Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46132g00001 GAGGAGAGGAGGCTGGCTGAAGAGAGGAGATTAGTTGCTGAGGTTGCATTGATGGAAGCTGAGATGAGAGTGGGTGAAGACAGTAATGTGGGGGGTGCTTCTGCAGGGGTGGATGTGGAGACGCCGATTAGAAGAAGGGGTCGTGTTCGCAACCGCATTCGTGGTGATATGAGGGCAGCGGCATTGATGAGGAAGCGTGAGTTGTGGTTGTATCGTGATAAGCGGATAGTTGGACCGATACCTGGAGTTTATGTTGGTGATGTGTTTCTTTTTAGGATGGAGTTGTGTGTGGTTGGTTTGCATATGCAGATACAAGCTGGCATTGATTATCTGCCTAAGAGTAGGTGTTCCAATGGTGAGCCAATTGCTACGAGTGTTATTGTCTCGGGCGGTTATGAGGATGATATGGAATTGAATGACGGTGATGTTATAATCTACACTGGCCATGGAGGACAAGAGAAGAATTCCTCAAGGCAAATCTGTGATCAGAAATTGGTGGGCGGAAACCTTGCTTTAGAAAGGAGTATGCATTATGGCATTGAGGTTAGGGTTATCCGTGGGATGAAGTACGAAGGGAGTGCGTCCGGTTCTGGTAAGGTATATGTTTACGACGGACTATATAGAATTGTTGATTGTTGGTTTGATGTTGGAAAGTCTGGCTTTGGAGTTTATAAGTATAAGCTTATGAGAATTGAGGGGCAAGCTAAGTTGGGTAGTGCTGTTCTCAAAGAAGCTAGAGATATTAAGAAAAGTGGAGTGGGAAAGCTACTGGTTGCCAGTGTGTGGAAGCTTGTACTGATGGTTGCTTTTGCTCTATGA 819 0.4567 EERRLAEERRLVAEVALMEAEMRVGEDSNVGGASAGVDVETPIRRRGRVRNRIRGDMRAAALMRKRELWLYRDKRIVGPIPGVYVGDVFLFRMELCVVGLHMQIQAGIDYLPKSRCSNGEPIATSVIVSGGYEDDMELNDGDVIIYTGHGGQEKNSSRQICDQKLVGGNLALERSMHYGIEVRVIRGMKYEGSASGSGKVYVYDGLYRIVDCWFDVGKSGFGVYKYKLMRIEGQAKLGSAVLKEARDIKKSGVGKLLVASVWKLVLMVAFAL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46132g00001 272 SUPERFAMILY PUA domain-like 59 242 IPR015947 -
Trme46132g00001 272 SMART G9a_1 73 234 IPR003105 -
Trme46132g00001 272 Gene3D - 58 253 IPR036987 -
Trme46132g00001 272 Pfam SAD/SRA domain 77 234 IPR003105 -
Trme46132g00001 272 ProSiteProfiles YDG domain profile. 78 230 IPR003105 -
Trme46132g00001 272 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 39 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme46132g00001 Trme-Chr46132 1 976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46132g00001 74 236 Su(var)3-9 homologs AT1G73100 50.307 1.95e-43 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46132g00001 K11420 - tpra:123924427 426.017