Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme461077g00001 GCTGGAAGCAGAGTTGGTTCTGCATCTTACTTTGGTTATGCAGCTAGAACAGCTTCAGGAGTTGCTCCGAATTCGCATGTCGTGATGTATAAGGCTCTATGGAAAGAAGCTGTTTTTTCATCTGATGTAATAGCTGCAATTGATGCTGCAATATCAGACGGTGTTGATGTTCTTTCATTATCATTTGGTTCTACTGAATTTGTACCTTTGTATGAAGATCCACTAGCCATAGCAACATTTGCAGCTATGAAAAAAGGTGTTTTTGTCTCGTGTGCAGCTGGAAATGGC 288 0.4097 AGSRVGSASYFGYAARTASGVAPNSHVVMYKALWKEAVFSSDVIAAIDAAISDGVDVLSLSFGSTEFVPLYEDPLAIATFAAMKKGVFVSCAAGNG 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme461077g00001 96 Pfam Subtilase family 16 96 IPR000209 GO:0006508|GO:0008236
Trme461077g00001 96 SUPERFAMILY Subtilisin-like 15 96 IPR036852 GO:0004252|GO:0006508
Trme461077g00001 96 ProSiteProfiles Serine proteases, subtilase domain profile. 1 96 - -
Trme461077g00001 96 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 95 IPR045051 -
Trme461077g00001 96 Gene3D Peptidase S8/S53 domain 1 95 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme461077g00001 Trme-Chr461077 1 288 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme461077g00001 1 95 Subtilisin-like Serine Gene Family AT5G67090 53.922 6.03e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme461077g00001 - - spen:107015560 130.568