Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme46093g00001 ATGATGCATCATCAGCCACAGCTACACTATGGTTCATTTCCTCATTCTCCTCAACAAAAACAACAGTACTATTCTGAGCTTATAAGTGATTTTGGAAATTGTAGAAACAGAACTGTTCAACCACATCAAGTCATTGTCACTGATTGGTTTCTAAATGCTGAAACCAATTCTCTTGCATCTAATGTTTCTAAAAACAAGGCTTATAATAATGTTTCTCAGTTTGATCAAGAGGGGACTTCAACTTCAAGAGATGAATTTCAAACTATGAAGTATGTGAAGCCTTCAATCATTTCAAGAGATTGTGGAAAATCACTTCAAGACTTAGTGGTTGGAATGATACCAAATTCAAAGATTAGTACTGTTGGTCCACTTGGTCCTTTTACTGGTTATGCTACTGTTCTTAAGAATTCAAGATTCTTAAAGATTGCTCAAAATTTGTTAGATGAGTTTTGTTCAAAATTTGTGACAACATATGATGTTTTAGAAACTGATGTTGCTTCTAAAGGGAGTAATTATTCATGTTCTTCATCATCTATGTTTCATAGTGCTGATTGGGGGGTTAGAAGTAATTTTGGTGTTTCTATGAGGCCAGATTATCAACAGATTAAAGCTAAGCTTATGTGTATGCAAGATGAGGTTGGTTTTTAA 648 0.3395 MMHHQPQLHYGSFPHSPQQKQQYYSELISDFGNCRNRTVQPHQVIVTDWFLNAETNSLASNVSKNKAYNNVSQFDQEGTSTSRDEFQTMKYVKPSIISRDCGKSLQDLVVGMIPNSKISTVGPLGPFTGYATVLKNSRFLKIAQNLLDEFCSKFVTTYDVLETDVASKGSNYSCSSSSMFHSADWGVRSNFGVSMRPDYQQIKAKLMCMQDEVGF 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme46093g00001 215 Pfam Associated with HOX 133 213 IPR006563 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme46093g00001 116 213 Homeobox Transcription Factor Family AT2G27990 40.594 2.02e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme46093g00001 - - psat:127083522 167.548