Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme460189g00001 GATGTGATGAATGCAATTATTGGAATTATTGCTGATGCTGTTACTATTGTTGTTGTTGCTATTCCTGAGGGTTTGCCATTAGCTGTGACATTGACTCTTGCCTATTCAATGAAGAAAATGATGGCTGATCAAGCTATGGTTAGAAAACTTTCTGCTTGTGAAACAATGGGATCTGCTACTACTATCTGCACTGACAAAACAG 202 0.3812 DVMNAIIGIIADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKT 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme460189g00001 67 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 57 IPR023298 -
Trme460189g00001 67 Gene3D - 2 67 - -
Trme460189g00001 67 PANTHER CATION TRANSPORTING ATPASE 2 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme460189g00001 Trme-Chr460189 88 289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme460189g00001 15 67 Primary Pumps ATPases AT3G22910 90.566 3.52e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme460189g00001 K01537 - gmx:100793918 115.931