Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme458622g00001 ACTATTGGCATTTCTGTTGATCATCGCCGCAAGAACCGATCCTTAGAAGGTCTGCAAGCCAACGTGCAGAGGCTGAAAACATACAAGGCCAAGCTGGTTGTCTTCCCAAGACGCGCACGCAAGGTCAAGTCCGGTGACTCTACTCCTGAGGAACTTGCAAACGCTACACAGGTTCAAGGATCATACTTGCCTATTG 196 0.5 TIGISVDHRRKNRSLEGLQANVQRLKTYKAKLVVFPRRARKVKSGDSTPEELANATQVQGSYLPI 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme458622g00001 65 MobiDBLite consensus disorder prediction 49 65 - -
Trme458622g00001 65 Pfam Ribosomal protein L13e 1 64 IPR001380 GO:0003735|GO:0005840|GO:0006412
Trme458622g00001 65 PANTHER 60S RIBOSOMAL PROTEIN L13 1 65 IPR001380 GO:0003735|GO:0005840|GO:0006412
Trme458622g00001 65 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme458622g00001 Trme-Chr458622 1 290 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme458622g00001 1 65 Cytoplasmic Ribosomal Protein Gene Family AT5G23900 90.769 2.81e-39 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme458622g00001 K02873 - osa:4339923 122.864