Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45839g00001 GCGGAGGCTAAAATACTGCGAGGGCCACATGAGGATCTAGAAAGCTATTTGGAAGCAGTTGATCAGCTTAGATCAAATGTTCGTTTCTTCAGCAGCAAAAAGAGTTTCAAAAGCAGTGAAGGTATCATCAACCATGCAAACAACTTGCTTGCTAAAGCTATCTTAAAGCTTGAAGATGAATTTAAACATCTTTTGACAAATTACAGCTCTTTGAGGTAG 219 0.3881 AEAKILRGPHEDLESYLEAVDQLRSNVRFFSSKKSFKSSEGIINHANNLLAKAILKLEDEFKHLLTNYSSLR 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45839g00001 72 SUPERFAMILY Cullin repeat-like 2 70 IPR016159 -
Trme45839g00001 72 Gene3D Exocyst complex component Exo70 1 71 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45839g00001 1 69 EXO70 exocyst subunit family AT5G52340 69.565 1.94e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45839g00001 K07195 - gmx:100779774 106.301