Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45798g00001 ATGGCGACGAAATCCTACCGCCGACATAGCAGTAACAATGGCGACAGTTGCTGCTGTAGCAGATGTCTCTGCGGCTGTTTCAACTGCTGCTGCAGATGTCTCTGTAGCTGTATCGGCTACTTTTTCAACTACATCTTAAGCATAATCTGCAACATCATAATTGCCGTAGTAATATTCGCGGTTCTCTTCTGGCTTATCGTTCGTCCAAACTACATAAAATTCACTGTAACTGATACATCCCTTACTCAATTNAATTTCAGAAACAACAACACACTTCACTATGATCTTTCCGTCAACATCACGATCAGAAACCCTAATCGAAGAGTTGGCATCTACTATGATAACATCGAAATGCTTGCATTTTATAAGGATGTTAGGTTTGGTTCTCAAACTTTTGGAAAATTCTTTCAGAGTCATAAGAATACAAGTTTCTTGAACGCAGTTTTTAGAGGTCAGAAAGTGATTCCTTTAAGTTCTGATCAGATTTCGGAACTGGATAAAGAGACGAAAAACGGAGTTTATGCAATTGTTGTGAAGGTTTTGCTTAAAGCAAGGTTTAAACTTGGTTTGTTCAACACATGGGAAGGGAATCCTAAGGTTCGTTGTGATTTGCAGGTTCCTTTGAAATCCGGCAATGAAATTTCGCCGGGTAATGAATTTCTAGCCACTAATTGTGATTGGGATGACAAATGGTGGTTGTTCCGTTAG 708 0.3955 MATKSYRRHSSNNGDSCCCSRCLCGCFNCCCRCLCSCIGYFFNYILSIICNIIIAVVIFAVLFWLIVRPNYIKFTVTDTSLTQXNFRNNNTLHYDLSVNITIRNPNRRVGIYYDNIEMLAFYKDVRFGSQTFGKFFQSHKNTSFLNAVFRGQKVIPLSSDQISELDKETKNGVYAIVVKVLLKARFKLGLFNTWEGNPKVRCDLQVPLKSGNEISPGNEFLATNCDWDDKWWLFR 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45798g00001 235 PANTHER OS05G0367900 PROTEIN 30 210 IPR044839 GO:0098542
Trme45798g00001 235 Pfam Late embryogenesis abundant protein 99 202 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45798g00001 Trme-Chr45798 30 737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45798g00001 66 217 SNARE and Associated Proteins AT1G32270 37.500 2.81e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45798g00001 - - tpra:123896029 274.633