Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45768g00001 ATGATGCCTCATAAATCTCAAGGTGGAGGAGCTGAACAGCTTGCAAATGTTGGGGTTTTGAGTGGATCTGCTGTGAAAAATGTTGCACCTGCACCTGCACCTTCTGGGGGTGGTGGGAAACAGCGTTTGCGTTGGACGTCTGATCTTCATGATCGTTTTGTGGATGCTATTACGCAGCTTGGTGGACCAGATAGTGG 197 0.4924 MMPHKSQGGGAEQLANVGVLSGSAVKNVAPAPAPSGGGGKQRLRWTSDLHDRFVDAITQLGGPDSG 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45768g00001 66 Gene3D - 39 65 - -
Trme45768g00001 66 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 39 64 IPR044848 GO:0003700
Trme45768g00001 66 NCBIfam myb-like DNA-binding domain, SHAQKYF class 40 65 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45768g00001 Trme-Chr45768 728 924 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45768g00001 40 64 G2-like Transcription Factor Family AT4G13640 84.000 7.52e-11 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45768g00001 - - tpra:123889278 119.783