Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme457653g00001 ATGACTATAATGTTAAATATGTTCATTGCTGGGCCTGTATCAGGAGGTTCTATGAACCCAGCAAGAAGTATTGGTCCTGCACTTGTG 87 0.4138 MTIMLNMFIAGPVSGGSMNPARSIGPALV 29
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme457653g00001 29 Pfam Major intrinsic protein 2 29 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme457653g00001 29 Gene3D Glycerol uptake facilitator protein. 1 29 IPR023271 -
Trme457653g00001 29 SUPERFAMILY Aquaporin-like 2 29 IPR023271 -
Trme457653g00001 29 PANTHER AQUAPORIN NIP2-1 1 29 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme457653g00001 Trme-Chr457653 51 217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme457653g00001 1 29 Major Intrinsic Protein MIP AT5G37810 79.310 3.28e-11 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme457653g00001 K09874 - csin:114290644 57.3806