Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme457427g00001 CAAGATGAGAATGCGGTGGAGAAAGAACCTCCGCCTGCTCCTCCGCCGCGGTTTCACGTCCATTCGTTTTGTAAAACGTTGACTGCGTCCGATACTAGTACTCATGGTGGTTTTTCTGTTCTTAGGCGTCACGCTGATGAATGTCTTCCTCCACTGGTTTGA 162 0.5 QDENAVEKEPPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLV 53
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme457427g00001 53 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 52 IPR044835 GO:0003677|GO:0006355|GO:0009725
Trme457427g00001 53 MobiDBLite consensus disorder prediction 1 20 - -
Trme457427g00001 53 SUPERFAMILY DNA-binding pseudobarrel domain 19 52 IPR015300 -
Trme457427g00001 53 Gene3D - 20 53 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme457427g00001 Trme-Chr457427 3 164 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme457427g00001 1 52 B3 DNA Binding Superfamily AT5G62000 90.385 2.07e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme457427g00001 - - sind:105158218 102.834