Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45715g00001 GTGCTGGCCATTGGTTCCTTCCATGCTGTTGCTGAAGGAATTTCTGTAGTATGCTCTGGTGGTAATTCTGGACCATATGCTCAAACTGTCATAAATACTGCTCCTTGGATTATTACCGTAGCTGCCAGTACCATTGATAGAGAATTTCCATCCACAATTATCTTGGGAAATAATCGAACTATACAGGGCCAGAGTTTATATACTGGCAAAGAATTGAACAAGTTTTATCCTATAGTATATGGAAAAGATATAGCAGCTTCAGATGCAGATGTAGTAAGTGCAAGGAGCTGTGAATCAGGAAGTCTGAATGCAACCTTAGCTAAAGGAAAAGCAATTCTGTGTTTCCAGTCTCGGTCACAGAGGTCTKCAACRGCTGCTGTAAGAAMTGTAATGGAATCTGAGGGTGTTGGTCTTATATATGCTCAGKKTCCTACTAAAKATGTTGATATGTCTTGGGATATACCCTCTGTCCAAGTTGATTTCATAGCAGGAACAACTATTCTATCATACATGGAAGCAACGACGAATCCTGTAATCAAGTTTAGCAAGACACGAACAGTTGTGGGGAAACAGATGTCTCCTGAT 585 0.4017 VLAIGSFHAVAEGISVVCSGGNSGPYAQTVINTAPWIITVAASTIDREFPSTIILGNNRTIQGQSLYTGKELNKFYPIVYGKDIAASDADVVSARSCESGSLNATLAKGKAILCFQSRSQRSXTAAVRXVMESEGVGLIYAQXPTKXVDMSWDIPSVQVDFIAGTTILSYMEATTNPVIKFSKTRTVVGKQMSPD 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45715g00001 195 Gene3D - 46 188 - -
Trme45715g00001 195 FunFam subtilisin-like protease SBT1.5 46 188 - -
Trme45715g00001 195 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 194 IPR045051 -
Trme45715g00001 195 SUPERFAMILY Subtilisin-like 3 97 IPR036852 GO:0004252|GO:0006508
Trme45715g00001 195 CDD PA_subtilisin_like 52 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45715g00001 Trme-Chr45715 2 994 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45715g00001 1 190 Subtilisin-like Serine Gene Family AT4G10540 46.907 1.61e-45 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45715g00001 - - ccaj:109818399 313.538