Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45694g00001 ATGGATGTGGTAGGTGGTTCTGCAATGGGAAGCCCGTGTTCATCTTACCATCCAAGTCCATGTGCTTCTTACAATCCAAGTCCTGGCTCTTCTTCCTTCCCTAGCCCGCGCTCATCCCATGCTGTAAATCCTAATGGTGATGCCAATTCCCTTATTCCTTGGCTTAAAAACCTCTCATCTGGATCATCATCAGCATCCTCTTCCAAGCATCCACAACTATTCATCCATACCGGCTCTATCAGTGCTCCCGTCACTCCTCCACTTAGCTCTCCGACTGCCCGATCATCACAGGCGAAAGCTGACATCTGGGAGGATCAGTCCATTCGTCCTGGGTGGGGCGGGCAGCAGAACCCTTTCCTGCCCTCATCCACTCCTCCGAGCCCTGGTCGCCAAGTTCTCGACCCAGATTGGTTTGCTGGGATTAGAATGCCCCAGGGTGGGCCAACTTCTCCTACCTTCAGCCTAGTCGCTACTAATCCATTTGGCTTCAGGGAAGAGGTTTTCTGTGGAAGTGATTCCCGCATGTGGACACCTGGACAAAGTGGGACATGTTCTCCAGCTATAGCTGCAGGCTCTGATCATACTGCTGACATACCGATGGCTGAATCTGTTTCAGACGAATTTGCCTTTGGTTTGGTGAAGCCTTGGGAAGGAGAAAGGATTCATGAAGATAGCGGATCAGATGATTTGGAGCTCACTCTTGGTAGCTCAAAGACCAGGTAA 723 0.5104 MDVVGGSAMGSPCSSYHPSPCASYNPSPGSSSFPSPRSSHAVNPNGDANSLIPWLKNLSSGSSSASSSKHPQLFIHTGSISAPVTPPLSSPTARSSQAKADIWEDQSIRPGWGGQQNPFLPSSTPPSPGRQVLDPDWFAGIRMPQGGPTSPTFSLVATNPFGFREEVFCGSDSRMWTPGQSGTCSPAIAAGSDHTADIPMAESVSDEFAFGLVKPWEGERIHEDSGSDDLELTLGSSKTR 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45694g00001 240 MobiDBLite consensus disorder prediction 108 129 - -
Trme45694g00001 240 Pfam BES1/BZR1 plant transcription factor, N-terminal 2 59 IPR008540 -
Trme45694g00001 240 MobiDBLite consensus disorder prediction 1 70 - -
Trme45694g00001 240 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 240 IPR033264 GO:0003700|GO:0006351|GO:0009742
Trme45694g00001 240 MobiDBLite consensus disorder prediction 12 70 - -
Trme45694g00001 240 MobiDBLite consensus disorder prediction 220 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45694g00001 Trme-Chr45694 85 933 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45694g00001 1 240 BZR Transcription Factor Family AT1G78700 61.569 1.34e-84 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Trme45694g00001 BES1_N 1.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45694g00001 - - pvy:116115184 377.481