Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45683g00001 TGTGATGTAGACCTACTGCTGGCAACATTGTGTACTCGATCAATACAAACCCGAGAAGGAAATATTATCAAGGCCCTTGATTGTAATGCTGCTGTTGCTGGTCGGGATGCTTTGGCAAAAACTGTTTATGCTCGTTTATTTGATTGGCTTGTTGATAAGATCAATAGGTCTGTCGGACAAGATATCAATTCCCCGATGCAAATTGGAGTCTTGGATATTTATGGTTTTGAGTGCTTTAAGGATAATAG 248 0.3992 CDVDLLLATLCTRSIQTREGNIIKALDCNAAVAGRDALAKTVYARLFDWLVDKINRSVGQDINSPMQIGVLDIYGFECFKDN 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45683g00001 82 ProSiteProfiles Myosin motor domain profile. 1 82 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme45683g00001 82 PANTHER MYOSIN 1 82 - -
Trme45683g00001 82 Gene3D Myosin VI head, motor domain, U50 subdomain 1 81 - -
Trme45683g00001 82 Pfam Myosin head (motor domain) 5 82 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme45683g00001 82 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 82 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45683g00001 Trme-Chr45683 41 381 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45683g00001 1 82 Myosins gene family AT4G33200 80.488 1.37e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45683g00001 K10357 - csav:115706112 160.229