Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme456073g00001 GCAAAGACGGCGCTGGTGGATGAAGGTGGCGTTCCAGTGTTGGTGGAAATCGTTGAAGTTGGATCGCAGAGACAGAAAGAAATCGCGGCGGTTATTCTGTTACAGCTTTGTGAAGATAACGTGGCTTATCGATCCATGGTGGCTCGCGAAGGTGCGATTCCACCTTTGGTTGCTTTGACTCAATCGGGCACCAATCGCGCAAAACAAAAG 210 0.5048 AKTALVDEGGVPVLVEIVEVGSQRQKEIAAVILLQLCEDNVAYRSMVAREGAIPPLVALTQSGTNRAKQK 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme456073g00001 70 Gene3D - 1 70 IPR011989 -
Trme456073g00001 70 PANTHER U BOX DOMAIN-CONTAINING 2 70 - -
Trme456073g00001 70 SUPERFAMILY ARM repeat 2 65 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme456073g00001 2 70 U-box Gene Family AT3G54790 60.870 8.90e-23 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme456073g00001 - - jre:109001105 123.635