Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45566g00001 ATGGAGGAGGATGAGATTCAAGCACAACATAAATTCCCTAGAGTTGGTAATGAAGAAGATAATAATAATGGAAGAAGAGATGTTAACAGGTTCAATAGTTGGCATCATTCTTCAAGAATCATAAGGGTTTCAAGAGCTTCTGGTGGAAAAGATAGGCATAGTAAAGTAATGACTTCAAAGGGTTTAAGAGATAGAAGAGTTAGGCTTTCTGTTACAACAGCTATTCAATTCTATGATCTTCAAGATAGACTTGGTTATGATCAACCAAGTAAAGCTGTTGAATGGTTGATTAAATCAGCTTCTGATGCTATTTCTGAATTACCTTCACTTAA 332 0.3464 MEEDEIQAQHKFPRVGNEEDNNNGRRDVNRFNSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSASDAISELPSL 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45566g00001 110 Pfam TCP family transcription factor 48 109 IPR017887 -
Trme45566g00001 110 ProSiteProfiles TCP domain profile. 49 107 IPR017887 -
Trme45566g00001 110 MobiDBLite consensus disorder prediction 1 31 - -
Trme45566g00001 110 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 107 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45566g00001 Trme-Chr45566 1 332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45566g00001 29 110 TCP Transcription Factor Family AT4G18390 86.747 1.10e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trme45566g00001 TCP 2.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45566g00001 - - mtr:120577367 197.593