Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45548g00001 GTGGATTTCGATGCATCAAAGGATGGATGCCTTGGAATTTTGACAACTGGCTCCACCAAAAAATCATTCAGATTTGACAGGGTTTATACACCAAAAGATGATCAAGCTGATGTTTTTGCTGATGCATCACCGATGGTAATCTCTGTGTTGGATGGCTACAACGTTTGCATMTTTGCTTACGGACAAACAGGAACAGGAAAAACATTTACCATGGAAGGAACCGARCAGAATAGAGGAGTCAATTACAGGACTCTTGAGCACTTGTTTARAGTTAGTAAGGAAAGGAGTGAAACATTTTCATACGACATATCTGTTAGCGTGCTTGAGGTTTATAATGAACAAATAAGAGACTTATTGGCTACTGGACCAACATCAAAAAGGTTGGAGATAAAACAAAACTCTGAAGGATATCATCATGTCCCTGGTGTTGTAGAAGCCAAGGTTGACAACATATGTGATGTGTGGAACGTACTGCAGACTGGAAGCAATGCTAGAGCAGTCGGAAGTAATAACGTTAATGAGCACAGTAGTCGATCTCATTG 542 0.4004 VDFDASKDGCLGILTTGSTKKSFRFDRVYTPKDDQADVFADASPMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFXVSKERSETFSYDISVSVLEVYNEQIRDLLATGPTSKRLEIKQNSEGYHHVPGVVEAKVDNICDVWNVLQTGSNARAVGSNNVNEHSSRSH 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45548g00001 180 ProSiteProfiles Kinesin motor domain profile. 1 180 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme45548g00001 180 SMART kinesin_4 1 180 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme45548g00001 180 Gene3D Kinesin motor domain 5 180 IPR036961 -
Trme45548g00001 180 Pfam Kinesin motor domain 17 180 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme45548g00001 180 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 180 IPR027417 -
Trme45548g00001 180 PRINTS Kinesin heavy chain signature 170 180 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme45548g00001 180 PRINTS Kinesin heavy chain signature 52 73 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme45548g00001 180 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 180 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45548g00001 Trme-Chr45548 164 996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45548g00001 20 180 Calmodulin-binding Proteins AT5G65930 42.073 1.36e-35 129