Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45541g00001 ATGTCTTCATGTTTAGATCTCTCCGGCTTTTTTGAGAAAGAGGATGTCTCAGAGAGGAAGATAAGATTTACTTCGAACTATTCACGGAAAGATTTGACAGAGAAAATTGAGGACATTGTAATAGAAATGGGATTTAGAGTTCAGAAGAAAAATGGAAAATTGAAAGTGATACTCGAGAATAAAGCTCATAAAAGTCTCGGAAGCTTCTCAGTGGTAGCCGAG 222 0.3694 MSSCLDLSGFFEKEDVSERKIRFTSNYSRKDLTEKIEDIVIEMGFRVQKKNGKLKVILENKAHKSLGSFSVVAE 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45541g00001 74 Pfam NAF domain 1 49 IPR004041 GO:0007165
Trme45541g00001 74 Gene3D Kinase associated domain 1, KA1 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45541g00001 Trme-Chr45541 93 715 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45541g00001 1 74 CBL-interacting serine-threonine protein kinases AT3G17510 64.865 2.23e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45541g00001 K07198 - qsa:O6P43_003749 122.864