Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme4551g00001 ATGGTTGTCGAGAGTGTTGAGCAATACCCTTCGCTTGGTCGTTTTGCTGTCAGAGACATGGGACAAACTGTTGCTATTGGAGTTATCATATCTGTGACCAAGAAGGGGCAAAAAGAGAAGCCAGCGACAAAGATGATCAGTTCCATTACTGATCAGAAAGATGTTGTACCAATGAATGCGGCCGATTCTTCTCCCAACATAGCATCCAACAAGAGAAAAGGACCCACTGAAGCAGTTTCTTCTTCAAAATCTGCCAAGAAAGTAAGCATGTAG 273 0.4359 MVVESVEQYPSLGRFAVRDMGQTVAIGVIISVTKKGQKEKPATKMISSITDQKDVVPMNAADSSPNIASNKRKGPTEAVSSSKSAKKVSM 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme4551g00001 90 MobiDBLite consensus disorder prediction 56 90 - -
Trme4551g00001 90 Pfam Elongation factor Tu C-terminal domain 3 32 IPR004160 -
Trme4551g00001 90 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 1 32 IPR009001 -
Trme4551g00001 90 PANTHER ELONGATION FACTOR 1 ALPHA 1 45 - -
Trme4551g00001 90 Gene3D Translation factors 1 34 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme4551g00001 1 35 Eukaryotic Initiation Factors Gene Family AT5G60390 74.286 4.65e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme4551g00001 K03231 - leri:129709716 56.6102