Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45513g00001 ATGTACAGGCAAATCGGTAAAGGAGAAGTCAAATTTCCTAAATGGTTTGCACCAGAGGTTCGCCGGTTGTTGTCCAAAATATTGGATCCAAATCTAAAGACTCGGATATCAATGGCCAAGATCATGGAAAATTCTTGGTTTAAAAGGGGGTTAGAGAAGCCGATTATTATCGATATCGAAAAAAATGACCTAGCTTCTCTGCACGCTGATGGACTGTTCGAAGTGTCCGAGAACGGCAGTGATTCTAATACAGCGTTAAAACAACAACAGGCCAAACCCTGTAACAACTTAAACGCCTTTGATATCATCTCCTTCTCGTCTGGTTTTGACTTATCCAGCTTGTTCGAAGACACAATTCAAAAGAAAGAGATGCGGTTTACATCTAACAAGCCAGCTTCGATTATAATCTCTAAGTTCGAAGAAATTTGCAAATGTCTTCGCTTGAAAATTACGAAAAAAGATGGAGGTTTGTTGAAGCTGGAAAGTTCAAAGGAAGGAAGGAAAGGGACTGTGAATATTGATGCCGAGATTTTCGAGATTACACCTCTCTTCCATCTTGTGGAACTTAAGAAGTCCGATGGCGATACAGTGGAGTATCAGAAGCTTTTGCAACATGAGATTAGACCAGCACTTAAGGACATTGTGTGGAATTGGCAAGAACAACCTCATGAACTCCAACATGAAGCAGTGCTGGAGGAGCAACCAACAACCATCTCTTACTGA 723 0.4108 MYRQIGKGEVKFPKWFAPEVRRLLSKILDPNLKTRISMAKIMENSWFKRGLEKPIIIDIEKNDLASLHADGLFEVSENGSDSNTALKQQQAKPCNNLNAFDIISFSSGFDLSSLFEDTIQKKEMRFTSNKPASIIISKFEEICKCLRLKITKKDGGLLKLESSKEGRKGTVNIDAEIFEITPLFHLVELKKSDGDTVEYQKLLQHEIRPALKDIVWNWQEQPHELQHEAVLEEQPTTISY 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45513g00001 240 FunFam Non-specific serine/threonine protein kinase 92 216 - -
Trme45513g00001 240 SUPERFAMILY Protein kinase-like (PK-like) 2 55 IPR011009 -
Trme45513g00001 240 Pfam NAF domain 95 152 IPR004041 GO:0007165
Trme45513g00001 240 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 1 213 - -
Trme45513g00001 240 ProSiteProfiles NAF domain profile. 92 116 IPR018451 GO:0007165
Trme45513g00001 240 Gene3D Transferase(Phosphotransferase) domain 1 1 73 - -
Trme45513g00001 240 CDD CIPK_C 98 212 - -
Trme45513g00001 240 Gene3D Kinase associated domain 1, KA1 92 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45513g00001 Trme-Chr45513 220 942 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45513g00001 1 225 CBL-interacting serine-threonine protein kinases AT5G58380 51.477 4.06e-76 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45513g00001 K07198 - gmx:100815651 327.405