Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme4550g00001 | GTACCTATGGTAACTACTGAATCAGGTTTGCAATACAAGGATATTAAAGTTGGGCAAGGCCCTAATCCACCAGTTGGATTTCAGGTGGCTGCTAATTATGTTGCAATGGTTCCATCTGGACAAATATTTGATAGTTCATTGGAGAAAGGACAGCTTTACATTTTTCGCGTTGGATCGGGTCAGGTGATAAAAGGACTTGATGAAGGTCTTTTAAGCATGAAAGTAGGAGGGAAACGTCGGTTGTACATACCTGGACCATTGGCATTCCCAAAAGGACTTAATTCTGCTCCAGGAAGACCAAGAGTGGCTCCAAACAGTCCGGTAGTATTTGATGTAAGTTTGGAATATGTACCAGGACTAGAAGTGGATGATGAGGAATAA | 381 | 0.4199 | VPMVTTESGLQYKDIKVGQGPNPPVGFQVAANYVAMVPSGQIFDSSLEKGQLYIFRVGSGQVIKGLDEGLLSMKVGGKRRLYIPGPLAFPKGLNSAPGRPRVAPNSPVVFDVSLEYVPGLEVDDEE | 126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme4550g00001 | 126 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 25 | 114 | IPR001179 | GO:0003755 | |
| Trme4550g00001 | 126 | Gene3D | - | 1 | 115 | IPR046357 | GO:0003755 | |
| Trme4550g00001 | 126 | SUPERFAMILY | FKBP-like | 3 | 115 | - | - | |
| Trme4550g00001 | 126 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 26 | 118 | IPR001179 | GO:0003755 | |
| Trme4550g00001 | 126 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 2 | 118 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme4550g00001 | 7 | 114 | Calmodulin-binding Proteins | AT3G25230 | 36.697 | 1.08e-12 | 61.6 |