Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45498g00001 GATGCTTTCTATCTTATACACATGGCTCTCCAATTCCGTACTGCATATATTGCTCCATCATCTCGTGTTTTTGGACGGGGTGAGCTTGTCATAGATCCAGCACAGATAGCAAAGAGATACTTACGGCGATATTTCATCATTGATTTCTTATCAGTGTTACCCTTACCACAGATTGTGGTGTGGAGATTTCTTCAGAGTTCAAAAGGTTCAGATGTAGTCACAACAAAGCAGGCTTTACTTTTCATTATTTTGCTTCAGTACATTCCAAGATTTCTCCGTATGCTACCATTGACTTCTGAACTTAAGAGAACAGCTGGTGTCTTTGCTGAAACTGCTTGGGCTGGTGCTGCATATTATTTGCTATTGTTCATGCTTGCCAGCCATATAGTTGGATCGTTTTGGTACTTGTTAGCTGTTGAACGCAATGACTTTTGCTGGAAGAAGGCTTGTAGCGACAATGGGTACAACAAGAAATTCTTGTATTGTGGCAACCAATACATGCAAGGTTATAGTTCCTGGCAGAATAAAAGTGAAGCTATTCTTACATCACAGTGCTCTACAGATAATGATAATCCTCCTTTTGACTATGGGATATTTACACAAGCCTTGAAATCTGGCATTGTTTCATCTAACAAGTTCTTGTCCAAGTACTGTTACTGTTTATGGTGGGGGCTTCAGAATTTGAG 686 0.3994 DAFYLIHMALQFRTAYIAPSSRVFGRGELVIDPAQIAKRYLRRYFIIDFLSVLPLPQIVVWRFLQSSKGSDVVTTKQALLFIILLQYIPRFLRMLPLTSELKRTAGVFAETAWAGAAYYLLLFMLASHIVGSFWYLLAVERNDFCWKKACSDNGYNKKFLYCGNQYMQGYSSWQNKSEAILTSQCSTDNDNPPFDYGIFTQALKSGIVSSNKFLSKYCYCLWWGLQNL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45498g00001 228 Gene3D - 1 227 - -
Trme45498g00001 228 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 228 - -
Trme45498g00001 228 SUPERFAMILY Voltage-gated potassium channels 1 226 - -
Trme45498g00001 228 Pfam Ion transport protein 1 227 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45498g00001 Trme-Chr45498 1 970 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45498g00001 1 228 Ion Channels AT5G57940 78.788 4.83e-131 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45498g00001 K05391 - gmx:100820202 426.017